The Ultimate Chocolate Ganache Cupcakes with Creamy Filling

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Introduction to Chocolate Ganache Cupcakes

If you’re a dessert lover searching for your next indulgent baking adventure, chocolate ganache cupcakes with a creamy center are a must-try. These cupcakes combine moist, rich chocolate cake with a surprise custard filling and a luxurious ganache topping, delivering a multi-layered bite of pure decadence. Whether you’re baking for a celebration, a holiday, or simply to satisfy your chocolate cravings, these cupcakes offer a bakery-quality result right from your kitchen.

The real magic of these cupcakes is the combination of textures: the fluffy cake, the velvety center, and the glossy ganache create a dessert that’s as beautiful as it is delicious. Inspired by the elegant simplicity of classic French pastry techniques—such as those used in chocolate ganache—this recipe is all about balance and indulgence. Similar to layered desserts featured in Pinterest’s chocolate cupcake boards, these treats are perfect for special occasions.

Best of all, these cupcakes are surprisingly simple to prepare. With a few baking staples, a bit of cooling time, and a little finesse, you’ll have a dozen perfectly filled cupcakes ready to wow. Pair them with a light meal like Stuffed Pasta Shells or serve as the star dessert after a hearty Italian dinner to complete the ultimate comfort food experience.


Why You’ll Love This Ganache Cupcake Recipe

These chocolate ganache cupcakes aren’t just pretty—they’re bakery-level indulgence with a homemade touch. Each cupcake hides a creamy custard surprise inside, making every bite rich, velvety, and unforgettable.

Unlike ordinary cupcakes, these are layered with texture and depth. From the moist chocolate base to the shiny ganache glaze, this recipe brings together everything chocolate lovers crave. The contrast between the warm cake and chilled filling mirrors the balance seen in gourmet French-inspired desserts. According to Wikipedia’s ganache entry, true ganache is crafted from quality chocolate and cream, and this recipe uses that exact approach.

It’s also versatile. Want to get creative? Swap the filling for caramel, raspberry jam, or a hazelnut spread. For visual inspiration and design tips, explore these Pinterest cupcake designs to give your ganache treats a decorative twist. Serve these alongside our comforting Stuffed Shells or pair with a fruity Orange Dreamsicle Salad for contrast.


Ingredients Breakdown

Creating these cupcakes is simple when you break down the components into three parts: cupcake base, creamy filling, and ganache topping.

For the Chocolate Cupcakes:

  • All-purpose flour – For structure and a light crumb.

  • Unsweetened cocoa powder – Delivers deep chocolate flavor.

  • Baking soda and baking powder – Help the cupcakes rise.

  • Granulated sugar and brown sugar – Add sweetness and moisture.

  • Eggs, milk, oil, and vanilla – Essential wet ingredients for richness and texture.

  • Hot coffee or water – Enhances cocoa flavor and creates a moist crumb.

For the Creamy Custard Filling:

  • Milk – Whole milk works best for a smooth texture.

  • Egg yolks – Help thicken the custard.

  • Cornstarch or flour – Acts as a thickening agent.

  • Sugar – Sweetens the filling.

  • Vanilla extract – Adds classic custard flavor.

  • Butter – Adds richness and shine.

Custards like these are common in French pastry and are detailed in Wikipedia’s list of custards.

For the Ganache Topping:

  • Dark or semi-sweet chocolate – Use high-quality for best results.

  • Heavy cream – Provides shine and smooth texture.

  • Butter (optional) – Enhances sheen and richness.

Explore similar ganache-topped desserts on Pinterest’s ganache inspiration boards to get ideas for decorations and pairings.

Step-by-Step Instructions

Part A: Making the Cupcakes and Filling

Start by preparing the chocolate cupcakes:

  1. Preheat oven to 350°F (175°C) and line a muffin tin with cupcake liners.

  2. In a bowl, whisk flour, cocoa, baking soda, and baking powder.

  3. In another bowl, beat eggs, sugars, milk, oil, and vanilla. Gradually mix in dry ingredients.

  4. Stir in hot coffee or water until smooth.

  5. Fill liners ¾ full and bake for 18–22 minutes. Let cool completely.

Next, make the custard filling:

  1. In a saucepan, whisk together milk, sugar, and cornstarch. Heat gently.

  2. In a separate bowl, whisk egg yolks. Slowly add warm milk mixture.

  3. Return to heat, stirring constantly until thickened.

  4. Remove from heat and stir in butter and vanilla.

  5. Cool, then chill before using.

Use a knife or cupcake corer to remove the center of each cupcake. Fill with custard using a piping bag or spoon.


Part B: Preparing and Applying the Ganache

To make the ganache:

  1. Heat heavy cream until just steaming.

  2. Pour over chopped chocolate in a bowl. Let sit for a minute.

  3. Stir until smooth. Add butter for extra gloss, if desired.

Let the ganache cool slightly before applying:

  • Spoon or dip the tops of the cupcakes into the ganache for full coverage.

  • Allow the ganache to set at room temperature or refrigerate briefly.

For visual styling, sprinkle with sea salt, chocolate curls, or gold dust. Explore more cupcake styling inspiration via Pinterest chocolate cupcake galleries.


Top Tips for Perfect Ganache Cupcakes

Creating flawless cupcakes comes down to a few professional tricks:

  • Don’t overfill liners – aim for ¾ full to prevent overflow.

  • Use quality chocolate – It makes or breaks the ganache.

  • Chill the custard completely – A warm filling will affect structure.

  • Cool cupcakes fully before coring or frosting.

  • Apply ganache at the right temp – Too warm, and it’ll run; too cold, and it won’t spread.

These tips echo practices seen in many Pinterest baking tips collections and ensure polished results.


Tasty Variations to Try

While classic is always a win, try these creative twists:

  • Mocha ganache cupcakes – Add espresso powder to the batter and ganache.

  • Raspberry-filled ganache cupcakes – Swap custard for raspberry jam.

  • Nutella-stuffed cupcakes – Replace custard with hazelnut spread.

  • Peanut butter twist – Add peanut butter to the filling or swirl into ganache.

  • Mint chocolate cupcakes – Add mint extract to the ganache for a cool finish.

Pair with a savory entrée like our Stuffed Shells or offer a lighter dessert like the Strawberry Cream Cheese Pound Cake to complete a decadent meal lineup.


How to Store and Serve

These cupcakes store beautifully and retain their flavor over several days:

  • Room Temperature: Store in an airtight container for up to 2 days.

  • Refrigeration: Best for longer storage—up to 5 days.

  • Freezing: Freeze unfrosted cupcakes and ganache separately. Thaw and assemble as needed.

Serve them slightly chilled or at room temperature for the best texture and ganache sheen. For party trays, decorate with themed toppers or edible glitter for a bakery finish.


Perfect Pairings and Presentation Ideas

Ganache cupcakes shine on their own or alongside complementary dishes. Try these ideas:

  • Serve with coffee or red wine – Both enhance chocolate richness.

  • Add fresh berries – Strawberries or raspberries add color and contrast.

  • Create a dessert trio – Serve mini cupcakes with Orange Dreamsicle Salad and a slice of Pound Cake.

Want more inspiration? Browse these stunning Pinterest chocolate dessert spreads to see how ganache cupcakes can anchor a dessert table.


Frequently Asked Questions (FAQs)

Can I make ganache cupcakes ahead of time?
Yes, the cupcakes can be made 1–2 days in advance. Fill and frost closer to serving for best results.

What kind of chocolate is best for ganache?
Use high-quality dark or semi-sweet chocolate for a rich, smooth finish. Learn more from Wikipedia’s page on chocolate.

Can I freeze filled cupcakes?
Yes, but it’s best to freeze them unfrosted. Add ganache after thawing for the best texture and shine.

Can I use boxed cake mix?
Absolutely. While homemade is preferred, boxed mix can save time. Just make sure it’s a rich chocolate variety.

How do I make the filling thicker?
Add more cornstarch or cook the custard longer until it coats the back of a spoon.

What can I use instead of custard?
Try whipped cream, Nutella, caramel, or even marshmallow fluff for different textures.

Print
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The Ultimate Chocolate Ganache Cupcakes with Creamy Filling


  • Author: The coozy plate

Description

Chocolate Ganache Cupcakes are rich, moist chocolate cakes filled with creamy vanilla custard and topped with a glossy, decadent ganache. A hidden surprise inside and a luxurious topping make these cupcakes a show-stopping treat for any dessert table.


Ingredients

Scale

For the vanilla cupcakes:

  • 1 1/2 cups all-purpose flour

  • 1 1/2 teaspoons baking powder

  • 1/4 teaspoon salt

  • 1/2 cup unsalted butter, softened

  • 1 cup granulated sugar

  • 2 large eggs

  • 2 teaspoons vanilla extract

  • 1/2 cup whole milk

For the vanilla custard filling:

  • 1 1/2 cups whole milk

  • 1/4 cup granulated sugar

  • 1 tablespoon cornstarch

  • 2 large egg yolks

  • 1 tablespoon unsalted butter

  • 1 teaspoon vanilla extract

For the chocolate ganache:

  • 1/2 cup heavy cream

  • 4 oz semi-sweet chocolate, finely chopped


Instructions

To make the vanilla cupcakes:

Preheat the oven to 350°F (175°C). Line a 12-cup muffin tin with paper liners.

In a medium bowl, whisk together the flour, baking powder, and salt.

In a large mixing bowl, beat the butter and sugar together with an electric mixer until light and fluffy, about 2 to 3 minutes.

Add the eggs, one at a time, beating well after each addition. Mix in the vanilla extract.

Add the dry ingredients in three parts, alternating with the milk. Start and end with the flour mixture. Mix until just combined—do not overmix.

Divide the batter evenly among the cupcake liners, filling each about two-thirds full.

Bake for 18 to 20 minutes, or until a toothpick inserted into the center comes out clean. Let the cupcakes cool in the pan for 5 minutes, then transfer to a wire rack to cool completely.

To make the custard filling:

In a medium saucepan, whisk together the sugar and cornstarch. Add the egg yolks and milk, and whisk until smooth.

Place the saucepan over medium heat and cook, whisking constantly, until the mixture thickens and starts to bubble, about 5 to 7 minutes.

Remove from the heat and stir in the butter and vanilla extract.

Transfer the custard to a bowl and cover with plastic wrap, pressing it directly onto the surface of the custard to prevent a skin from forming. Refrigerate until fully cooled.

To make the ganache:

In a small saucepan, heat the heavy cream over medium heat until it begins to simmer.

Remove from the heat and pour the hot cream over the chopped chocolate in a heatproof bowl.

Let sit for 2 minutes, then stir until smooth and glossy. Let the ganache cool slightly until it reaches a spreadable consistency.

To assemble the cupcakes:

Once the cupcakes are cool, use a cupcake corer or small knife to remove the center from each cupcake (about halfway deep). Save the tops if desired.

Fill each cupcake with about 1 to 2 teaspoons of chilled custard.

Replace the cupcake tops if using, then spoon or spread the ganache over the top of each cupcake.

Allow the ganache to set at room temperature for about 15 minutes, or refrigerate briefly to speed up the process.

Notes

  • Cool cupcakes completely before filling

  • Ganache should be warm but not hot for easy spreading

  • Use piping bags for neater filling

  • Keep refrigerated if using dairy-based custards

  • Can be made a day ahead and garnished before serving

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